| New York Yankees |
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| Farm System (Click the team name to view statistics) | |||||
| Class | Team | League | Manager | Hitting Coach | Pitching Coach |
| MAJ | New York Yankees | American | Joe Girardi | Kevin Long | Dave Eiland |
| AAA | Scranton/Wilkes-Barre Yankees | International | Dave Miley | Butch Wynegar | Rafael Chaves |
| AA | Trenton Thunder | Eastern | Tony Franklin | Tom Wilson | Scott Aldred |
| HiA | Tampa Yankees | Florida State | Luis Sojo | Aaron Ledesma | Greg Pavlick |
| LoA | Charleston RiverDogs | South Atlantic | Torre Tyson | Greg Colbrunn | Jeff Ware |
| SS | Staten Island Yankees | New York-Penn | Mike Gillespie | Ty Hawkins | — |
| R | GCL Yankees | Gulf Coast | Jody Reed | — | Carlos Chantres |
| R | DSL Yankees1 | Dominican | Carlos Mota | Argenis Paulino/Julio Valdez | Wilfredo Cordova |
| R | DSL Yankees2 | Dominican | Freddy Tiburcio | Sonder Encarnacion | Jose Duran |
| Organization Reports | ||
| Correspondent: George King, New York Post | ||
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2009 Organization Reports 2008 Organization Reports 2007 Organization Reports 2006 Organization Reports |
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Top Prospects (Click the year to view the top 10 prospects) |
Draft History (Click the year to view the picks) |
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| Year | Top Prospect | Position | Year | Top Pick | |
| 1992 | Brien Taylor | RHP | 1992 | Derek Jeter | |
| 1993 | Brien Taylor | RHP | 1993 | Matt Drews | |
| 1994 | Derek Jeter | SS | 1994 | Brian Buchanan | |
| 1995 | Ruben Rivera | OF | 1995 | Shea Morenz | |
| 1996 | Ruben Rivera | OF | 1996 | Eric Milton | |
| 1997 | Ruben Rivera | OF | 1997 | *Tyrell Godwin | |
| 1998 | Eric Milton | LHP | 1998 | Andy Brown | |
| 1999 | Nick Johnson | 1B | 1999 | David Walling | |
| 2000 | Nick Johnson | 1B | 2000 | David Parrish | |
| 2001 | Nick Johnson | 1B | 2001 | John-Ford Griffin | |
| 2002 | Drew Henson | 3B | 2002 | Brandon Weeden | |
| 2003 | Juan Rivera | OF | 2003 | Eric Duncan | |
| 2004 | Dioner Navarro | C | 2004 | Philip Hughes | |
| 2005 | Eric Duncan | 3B | 2005 | C.J. Henry | |
| 2006 | Philip Hughes | RHP | 2006 | Ian Kennedy | |
| 2007 | Philip Hughes | RHP | 2007 | Andrew Brackman | |
| 2008 | Joba Chamberlain | RHP | 2008 | Gerrit Cole | |
| 2009 | Austin Jackson | OF | 2009 | Slade Heathcott | |
| * did not sign | |||||
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