| San Diego Padres |
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| Farm System (Click the team name to view statistics) | |||||
| Class | Team | League | Manager | Hitting Coach | Pitching Coach |
| MAJ | San Diego Padres | National | Bud Black | Randy Ready | Darren Balsley |
| AAA | Tucson Padres | Pacific Coast | Terry Kennedy | Bob Skube | Steve Webber |
| AA | San Antonio Missions | Texas | Doug Dascenzo | Tom Tornincasa | Jimmy Jones |
| HiA | Lake Elsinore Storm | California | Carlos Lezcano | Phil Plantier | Bronswell Patrick |
| LoA | Fort Wayne TinCaps | Midwest | Shawn Wooten | Kory DeHaan | Willie Blair |
| SS | Eugene Emeralds | Northwest | Pat Murphy | Chris Prieto | Dave Rajsich |
| R | AZL Padres | Arizona | Jim Gabella | Ivan Cruz | Nelson Cruz |
| R | DSL Padres | Dominican | Carlos Hernandez | J. Mateo/J. Rosario | J. Amancio/C. Reyes |
| Organization Reports | ||
| Correspondent: John Maffei, North County Times, San Diego | ||
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2011 Organization Reports 2010 Organization Reports 2009 Organization Reports 2008 Organization Reports 2007 Organization Reports 2006 Organization Reports |
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Top Prospects (Click the year to view the top 10 prospects) |
Draft History (Click the year to view the picks) |
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| Year | Top Prospect | Position | Year | Top Pick | |
| 1992 | Joey Hamilton | RHP | 1992 | *Todd Helton | |
| 1993 | Ray McDavid | OF | 1993 | Derrek Lee | |
| 1994 | Joey Hamilton | RHP | 1994 | Dustin Hermanson | |
| 1995 | Dustin Hermanson | RHP | 1995 | Ben Davis | |
| 1996 | Ben Davis | C | 1996 | Matt Halloran | |
| 1997 | Derrek Lee | 1B | 1997 | Kevin Nicholson | |
| 1998 | Matt Clement | RHP | 1998 | Sean Burroughs | |
| 1999 | Matt Clement | RHP | 1999 | Vince Faison | |
| 2000 | Sean Burroughs | 3B | 2000 | Mark Phillips | |
| 2001 | Sean Burroughs | 3B | 2001 | Jake Gautreau | |
| 2002 | Sean Burroughs | 3B | 2002 | Khalil Greene | |
| 2003 | Xavier Nady | OF | 2003 | Tim Stauffer | |
| 2004 | Josh Barfield | 2B | 2004 | Matt Bush | |
| 2005 | Josh Barfield | 2B | 2005 | Cesar Carrillo | |
| 2006 | Cesar Carillo | RHP | 2006 | Matt Antonelli | |
| 2007 | Cedric Hunter | OF | 2007 | Nick Schmidt | |
| 2008 | Chase Headley | RHP | 2008 | Allan Dykstra | |
| 2009 | Kyle Blanks | 1B | 2009 | Donavan Tate | |
| 2010 | Donavan Tate | OF | 2010 | *Karsten Whitson | |
| 2011 | Casey Kelly | RHP | * did not sign | ||
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