| Pick | Overall | Team | Player | Position | School | State |
| 1 | 926 | Washington Nationals | Jeremy Mayo | C | Texas Tech | Texas |
| 2 | 927 | Pittsburgh Pirates | Jason Townsend | RHP | Alabama | Ala. |
| 3 | 928 | Baltimore Orioles | Adam Gaylord | 3B | Stanford | Calif. |
| 4 | 929 | Kansas City Royals | Parker Bangs | RHP | South Carolina | S.C. |
| 5 | 930 | Cleveland Indians | David Goforth | RHP | Mississippi | Miss. |
| 6 | 931 | Arizona Diamondbacks | Steven Sultzbaugh | OF | Rice | Texas |
| 7 | 932 | New York Mets | Steve Winnick | RHP | Point Loma Nazarene (Calif.) | Calif. |
| 8 | 933 | Houston Astros | Travis Blankenship | LHP | Kansas | Kan. |
| 9 | 934 | San Diego Padres | Oscar Garcia | OF | Northwestern State | La. |
| 10 | 935 | Oakland Athletics | Aaron Judge | 1B | Linden (Calif.) HS | Calif. |
| 11 | 936 | Toronto Blue Jays | Luis Benitez | RHP | Ashworth HS, Carolina, P.R. | P.R. |
| 12 | 937 | Cincinnati Reds | Dominic D'Anna | 1B | Cal State Northridge | Calif. |
| 13 | 938 | Chicago White Sox | Robert Young | LHP | Dartmouth | N.H. |
| 14 | 939 | Milwaukee Brewers | Mike Melillo | C | Elon | N.C. |
| 15 | 940 | Chicago Cubs | Benito Santiago | 1B | Lon Morris (Texas) JC | Texas |
| 16 | 941 | Tampa Bay Rays | Kevin Kiermaier | OF | Parkland (Ill.) JC | Ill. |
| 17 | 942 | Seattle Mariners | Jake Schlander | SS | Stanford | Calif. |
| 18 | 943 | Detroit Tigers | Matt Little | RHP | Kentucky | Ky. |
| 19 | 944 | Atlanta Braves | Jack Reinheimer | SS | Kell HS, Charlotte, N.C. | N.C. |
| 20 | 945 | Minnesota Twins | Mark Payton | OF | St. Rita HS, Orland Park, Ill. | Ill. |
| 21 | 946 | Texas Rangers | Justin Earls | LHP | Georgia | Ga. |
| 22 | 947 | Florida Marlins | Taiwan Easterling | OF | Florida State | Fla. |
| 23 | 948 | San Francisco Giants | Kyle Hardy | 3B | Crowder (Mo.) JC | Mo. |
| 24 | 949 | St. Louis Cardinals | Mike O'Neill | OF | Southern California | Calif. |
| 25 | 950 | Colorado Rockies | Russell Brewer | RHP | Vanderbilt | Tenn. |
| 26 | 951 | Philadelphia Phillies | Jim Klocke | C | Southeast Missouri State | Mo. |
| 27 | 952 | Los Angeles Dodgers | Derek Cone | RHP | Mesa (Ariz.) CC | Ariz. |
| 28 | 953 | Boston Red Sox | Hunter Renfroe | C | Copiah Academy, Gallman, Miss. | Miss. |
| 29 | 954 | Los Angeles Angels | Mike Sodders | 2B | New Mexico State | N.M. |
| 30 | 955 | New York Yankees | Mike Gipson | RHP | Florida Atlantic | Fla. |