| Pick | Overall | Team | Player | Position | School | State |
| 1 | 802 | Washington Nationals | Brandon King | RHP | Martinsburg (W.Va.) HS | W.Va. |
| 2 | 803 | Seattle Mariners | Austin Hudson | RHP | Central Florida | Fla. |
| 3 | 804 | San Diego Padres | Cameron Monger | OF | New Mexico | N.M. |
| 4 | 805 | Pittsburgh Pirates | Wes Luquette | C | Newman HS, New Orleans | La. |
| 5 | 806 | Baltimore Orioles | Mike Planeta | OF | Glendale (Ariz.) CC | Ariz. |
| 6 | 807 | San Francisco Giants | Kyle Mach | 3B | Missouri | Mo. |
| 7 | 808 | Atlanta Braves | Joey Leftridge | OF | Howard (Texas) JC | Texas |
| 8 | 809 | Cincinnati Reds | Stefan Del Pino | LHP | Dorman HS, Roebuck, S.C. | S.C. |
| 9 | 810 | Detroit Tigers | Pat McKenna | SS | Bryant (R.I.) | R.I. |
| 10 | 811 | Colorado Rockies | Dan Perkins | RHP | Delaware State | Del. |
| 11 | 812 | Kansas City Royals | Gabe MacDougall | OF | Lynn (Fla.) | Fla. |
| 12 | 813 | Oakland Athletics | Michael Gilmartin | 2B | Wofford | S.C. |
| 13 | 814 | Texas Rangers | Aaron Barrett | RHP | Mississippi | Miss. |
| 14 | 815 | Cleveland Indians | Tyler Sturdevant | RHP | New Mexico State | N.M. |
| 15 | 816 | Arizona Diamondbacks | Jake Hale | RHP | Ohio State | Ohio |
| 16 | 817 | Los Angeles Dodgers | Brian Johnson | LHP | Cocoa Beach (Fla.) HS | Fla. |
| 17 | 818 | Florida Marlins | Nate Simon | 2B | Pepperdine | Calif. |
| 18 | 819 | St. Louis Cardinals | John Folino | RHP | Connecticut | Conn. |
| 19 | 820 | Toronto Blue Jays | Brian Justice | RHP | St. Mary's | Calif. |
| 20 | 821 | Houston Astros | Aaron Bray | 3B | Charlotte | N.C. |
| 21 | 822 | Minnesota Twins | Eric Decker | OF | Minnesota | Minn. |
| 22 | 823 | Chicago White Sox | Kyle Davis | 2B | Delaware | Del. |
| 23 | 824 | New York Mets | Kurt Steinhauer | OF | Point Loma Nazarene (Calif.) | Calif. |
| 24 | 825 | New York Yankees | Jeff Farnham | C | New Mexico State | N.M. |
| 25 | 826 | Milwaukee Brewers | Ryan Platt | RHP | UC Riverside | Calif. |
| 26 | 827 | Philadelphia Phillies | Marlon Mitchell | C | Hillsborough HS, Tampa | Fla. |
| 27 | 828 | Boston Red Sox | Reed Gragnani | SS | Godwin HS, Richmond | Va. |
| 28 | 829 | Tampa Bay Rays | Brady Wager | RHP | Globe (Ariz.) HS | Ariz. |
| 29 | 830 | Chicago Cubs | Corey Martin | RHP | Western Carolina | N.C. |
| 30 | 831 | Los Angeles Angels | Devon Zenn | OF | Benicia (Calif.) HS | Calif. |